JETtransp Output

Steps dirs & config

>JETtransp 77694J07 new names 77694J06 config TrArg::Print -U- -=- Requested Shot 77694 Seq J07 steps from default to config requested TrDir::TransParent -I- Choose directory in which to create the new TWD  1 /common/transp_shared/Data/work/jconboy/JETRF 2 /common/transp_shared/Data/work/jconboy/JETtest 3 /common/transp_shared/Data/work/jconboy/JETybar 4 /common/transp_shared/Data/work/jconboy/JETcx 5 /common/transp_shared/Data/work/jconboy/regt/JET_37 6 /common/transp_shared/Data/work/jconboy/regt/JET_38 7 /common/transp_shared/Data/work/jconboy/regt/JET_35 8 /common/transp_shared/Data/work/jconboy/JETsim TrDir::TransParent -Q- Enter number of your selection , or 0 to quit 2 main::Process -U- -=- Processing 77694J07 () in /common/transp_shared/Data/work/jconboy/JETtest/77694J07 main::SetupNewRun -I- Starting new Transp run 77694J07 TrDat::NewTrDat -U- -=- copying TR.DAT from /common/transp_shared/Data/work/jconboy/JETtest/77694J06/77694J06TR.DAT main::Choose_Steps -U- -=- running from config to config main::Process -U- -=- Running config main::Process -U- -=- All requested steps completed

Status

>JETtransp stat TrArg::Print -U- -=- Requested default shot steps from default to default requested ./runsys/JETtransp -U- -=- Using default run 77694J07 ]0;77694J07/JET_52/jconboy main::Process -U- -=- Processing 77694J07 (JET_52) in /common/transp_shared/Data/work/jconboy/JETtest/77694J07 == Run History == 1 dirs / 'Create TWD ' Executed "Tue Aug 3 14:12:50 BST 2010" cond 0 2 dbase / 'Add run to the transp database' Executed cond 0 3 config / 'Configure the run ' Executed "Tue Aug 3 14:15:57 BST 2010" cond 0 4 data * 'Create input data - Ufiles ' Ready 7 trdat 'Prepare Physics file ' 8 plabel 'Write index of data ' 9 Prep 'Prepare transp makefiles ' 10 runMPI 'Execute local MPI run ' 14 rstart 'Restart transp run ' 15 trlook 'Plot transp output ' 16 cdfcnv 'Create netcdf files ' 19 dbupd 'Mark local run as completed ' 20 arch 'Copy output files to warehouse ' 21 mdstr 'Create mdsplus tree for output' 22 tidy 'Tidy TWD after run '

Step data

>JETtransp data TrArg::Print -U- -=- Requested default shot steps from default to data requested ./runsys/JETtransp -U- -=- Using default run 77694J07 main::Process -U- -=- Processing 77694J07 (JET_52) in /common/transp_shared/Data/work/jconboy/JETtest/77694J07 == Run History == 1 dirs / 'Create TWD ' Executed "Thu Jul 29 15:30:53 BST 2010" cond 0 2 dbase / 'Add run to the transp database' Executed cond 0 3 config / 'Configure the run ' Executed "Thu Jul 29 15:32:11 BST 2010" cond 0 4 data * 'Create input data - Ufiles ' Ready 7 trdat 'Prepare Physics file ' 8 plabel 'Write index of data ' 9 Prep 'Prepare transp makefiles ' 10 runMPI 'Execute local MPI run ' 14 rstart 'Restart transp run ' 15 trlook 'Plot transp output ' 16 cdfcnv 'Create netcdf files ' 19 dbupd 'Mark local run as completed ' 20 arch 'Copy output files to warehouse ' 21 mdstr 'Create mdsplus tree for output' 22 tidy 'Tidy TWD after run ' main::Choose_Steps -U- -=- running from data to data main::Process -U- -=- Running data TrArg::Print -U- -=- Requested Shot 77694 Seq J07 , step data requested /common/transp_shared/Code/transp/JET_52/runsys/JET_data -U- -=- Data preparation for 77694J07 main::NewTranspPPF -U- -=- No RF data for this shot main::NewTranspPPF -U- -=- DDA KK3J exists already main::SetupSDD -U- -=- Found 1 Ufiles in SDD main::Aux_Ufiles -I- Running scruncher in /common/transp_shared/Code/transp/JET_52/data/JETdirs/77694 main::Setup_Ufiles -U- -=- TrFile status 0 main::Process -U- -=- All requested steps completed

Step trdat

>JETtransp next TrArg::Print -U- -=- Requested default shot , next step requested ./runsys/JETtransp -U- -=- Using default run 77694J07 main::Process -U- -=- Processing 77694J07 (JET_52) in /common/transp_shared/Data/work/jconboy/JETtest/77694J07 == Run History == 1 dirs / 'Create TWD ' Executed "Thu Jul 29 15:30:53 BST 2010" cond 0 2 dbase / 'Add run to the transp database' Executed cond 0 3 config / 'Configure the run ' Executed "Thu Jul 29 15:32:11 BST 2010" cond 0 4 data / 'Create input data - Ufiles ' Executed "Thu Jul 29 15:34:15 BST 2010" cond 0 7 trdat * 'Prepare Physics file ' Ready 8 plabel 'Write index of data ' 9 Prep 'Prepare transp makefiles ' 10 runMPI 'Execute local MPI run ' 14 rstart 'Restart transp run ' 15 trlook 'Plot transp output ' 16 cdfcnv 'Create netcdf files ' 19 dbupd 'Mark local run as completed ' 20 arch 'Copy output files to warehouse ' 21 mdstr 'Create mdsplus tree for output' 22 tidy 'Tidy TWD after run ' main::Choose_Steps -U- -=- running from trdat to trdat main::Process -U- -=- Running trdat main::Process -U- -=- All requested steps completed

Step plabel

>JETtransp next TrArg::Print -U- -=- Requested default shot , next step requested ./runsys/JETtransp -U- -=- Using default run 77694J07 main::Process -U- -=- Processing 77694J07 (JET_52) in /common/transp_shared/Data/work/jconboy/JETtest/77694J07 == Run History == 1 dirs / 'Create TWD ' Executed "Thu Jul 29 15:30:53 BST 2010" cond 0 2 dbase / 'Add run to the transp database' Executed cond 0 3 config / 'Configure the run ' Executed "Thu Jul 29 15:32:11 BST 2010" cond 0 4 data / 'Create input data - Ufiles ' Executed "Thu Jul 29 15:34:15 BST 2010" cond 0 7 trdat / 'Prepare Physics file ' Executed "Thu Jul 29 15:36:38 BST 2010" cond 0 8 plabel * 'Write index of data ' Ready 9 Prep 'Prepare transp makefiles ' 10 runMPI 'Execute local MPI run ' 14 rstart 'Restart transp run ' 15 trlook 'Plot transp output ' 16 cdfcnv 'Create netcdf files ' 19 dbupd 'Mark local run as completed ' 20 arch 'Copy output files to warehouse ' 21 mdstr 'Create mdsplus tree for output' 22 tidy 'Tidy TWD after run ' main::Choose_Steps -U- -=- running from plabel to plabel main::Process -U- -=- Running plabel main::Process -U- -=- All requested steps completed

Step prep

>JETtransp next TrArg::Print -U- -=- Requested default shot , next step requested ./runsys/JETtransp -U- -=- Using default run 77694J07 main::Process -U- -=- Processing 77694J07 (JET_52) in /common/transp_shared/Data/work/jconboy/JETtest/77694J07 == Run History == 1 dirs / 'Create TWD ' Executed "Thu Jul 29 15:30:53 BST 2010" cond 0 2 dbase / 'Add run to the transp database' Executed cond 0 3 config / 'Configure the run ' Executed "Thu Jul 29 15:32:11 BST 2010" cond 0 4 data / 'Create input data - Ufiles ' Executed "Thu Jul 29 15:34:15 BST 2010" cond 0 7 trdat / 'Prepare Physics file ' Executed "Thu Jul 29 15:36:38 BST 2010" cond 0 8 plabel / 'Write index of data ' Executed "Thu Jul 29 15:36:55 BST 2010" cond 0 9 Prep * 'Prepare transp makefiles ' Ready 10 runMPI 'Execute local MPI run ' 14 rstart 'Restart transp run ' 15 trlook 'Plot transp output ' 16 cdfcnv 'Create netcdf files ' 19 dbupd 'Mark local run as completed ' 20 arch 'Copy output files to warehouse ' 21 mdstr 'Create mdsplus tree for output' 22 tidy 'Tidy TWD after run ' main::Choose_Steps -U- -=- running from Prep to Prep main::Process -U- -=- Running Prep main::Process -U- -=- All requested steps completed

Step runMPI

>JETtransp runMPI TrArg::Print -U- -=- Requested default shot , step runMPI requested ./runsys/JETtransp -U- -=- Using default run 77694J07 main::Process -U- -=- Processing 77694J07 (JET_52) in /common/transp_shared/Data/work/jconboy/JETtest/77694J07 == Run History == 1 dirs / 'Create TWD ' Executed "Tue Aug 3 14:12:50 BST 2010" cond 0 2 dbase / 'Add run to the transp database' Executed cond 0 3 config / 'Configure the run ' Executed "Tue Aug 3 14:15:57 BST 2010" cond 0 4 data / 'Create input data - Ufiles ' Executed "Tue Aug 3 14:18:42 BST 2010" cond 0 7 trdat / 'Prepare Physics file ' Executed "Tue Aug 3 14:19:20 BST 2010" cond 0 8 plabel / 'Write index of data ' Executed "Tue Aug 3 14:19:57 BST 2010" cond 0 9 Prep / 'Prepare transp makefiles ' Executed "Tue Aug 3 14:20:04 BST 2010" cond 0 10 runMPI * 'Execute local MPI run ' Ready 14 rstart 'Restart transp run ' 15 trlook 'Plot transp output ' 16 cdfcnv 'Create netcdf files ' 19 dbupd 'Mark local run as completed ' 20 arch 'Copy output files to warehouse ' 21 mdstr 'Create mdsplus tree for output' 22 tidy 'Tidy TWD after run ' main::Process -U- -=- Running runMPI `_LL_' -> `/common/transp_shared/Data/work/jconboy/JETtest/77694J07/tr_77694J07_mpi/tr_77694J07_mpi' MPI_run::submit -Q- Submit /common/transp_shared/Data/work/jconboy/JETtest/77694J07/tr_77694J07_mpi/tr_77694J07_mpi (y/n) y llsubmit /common/transp_shared/Data/work/jconboy/JETtest/77694J07/tr_77694J07_mpi/tr_77694J07_mpi Your job 712017 ("tr_77694J07_mpi") has been submitted >llq | egrep $USER 712017 jconboy 04/08 08:57 Q 0 parallel any tr_77694J07_mpi 712017 jconboy 04/08 08:57 Q 0 parallel any tr_77694J07_mpi 712017 jconboy 04/08 08:57 Q 0 parallel any tr_77694J07_mpi 712017 jconboy 04/08 08:57 Q 0 parallel any tr_77694J07_mpi > >llq | egrep $USER 712017 jconboy 04/08 08:57 R 0 parallel batch-002 tr_77694J07_mpi 712017 jconboy 04/08 08:57 R 0 parallel batch-002 tr_77694J07_mpi 712017 jconboy 04/08 08:57 R 0 parallel batch-029 tr_77694J07_mpi 712017 jconboy 04/08 08:57 R 0 parallel batch-029 tr_77694J07_mpi 712017 jconboy 04/08 08:57 R 0 parallel batch-030 tr_77694J07_mpi 712017 jconboy 04/08 08:57 R 0 parallel batch-030 tr_77694J07_mpi 712017 jconboy 04/08 08:57 R 0 parallel batch-034 tr_77694J07_mpi 712017 jconboy 04/08 08:57 R 0 parallel batch-039 tr_77694J07_mpi >

status  - Run in Progress

>JETtransp stat TrArg::Print -U- -=- Requested default shot steps from default to default requested ./runsys/JETtransp -U- -=- Using default run 77694J07 main::Process -U- -=- Processing 77694J07 (JET_52) in /common/transp_shared/Data/work/jconboy/JETtest/77694J07 Lock::IsLocked -W- Locked by .Job_LL_712017 == Run History == 1 dirs / 'Create TWD ' Executed "Tue Aug 3 14:12:50 BST 2010" cond 0 2 dbase / 'Add run to the transp database' Executed cond 0 3 config / 'Configure the run ' Executed "Tue Aug 3 14:15:57 BST 2010" cond 0 4 data / 'Create input data - Ufiles ' Executed "Tue Aug 3 14:18:42 BST 2010" cond 0 7 trdat / 'Prepare Physics file ' Executed "Tue Aug 3 14:19:20 BST 2010" cond 0 8 plabel / 'Write index of data ' Executed "Tue Aug 3 14:19:57 BST 2010" cond 0 9 Prep / 'Prepare transp makefiles ' Executed "Tue Aug 3 14:20:04 BST 2010" cond 0 10 runMPI * 'Execute local MPI run ' Ready 14 rstart 'Restart transp run ' 15 trlook 'Plot transp output ' 16 cdfcnv 'Create netcdf files ' 19 dbupd 'Mark local run as completed ' 20 arch 'Copy output files to warehouse ' 21 mdstr 'Create mdsplus tree for output' 22 tidy 'Tidy TWD after run ' Lock::IsLocked -W- Locked by .Job_LL_712017 JbLock::PrintStatus -U- -=- 712017 jconboy 04/08 08:57 R 0 parallel batch-002 -=- 712017 jconboy 04/08 08:57 R 0 parallel batch-002 -=- 712017 jconboy 04/08 08:57 R 0 parallel batch-029 -=- 712017 jconboy 04/08 08:57 R 0 parallel batch-029 -=- 712017 jconboy 04/08 08:57 R 0 parallel batch-030 -=- 712017 jconboy 04/08 08:57 R 0 parallel batch-030 -=- 712017 jconboy 04/08 08:57 R 0 parallel batch-034 -=- 712017 jconboy 04/08 08:57 R 0 parallel batch-039 main::Qstat -U- -=- ID 0 batch-039 26366 TrUtil::RmStat -U- -=- Status information from batch-039, /tmp/jconboy/Transp/77694J07/712017/mpi-000 TrUtil::RmStat -I- Requested 7.5 to 12.5 seconds TrUtil::RmStat -I- 10.00% CHANGE MAY TRIGGER AN ABORT. TrUtil::RmStat -I- % RESTART RECORD WRITTEN AT TA= 7.5000000E+00 TrUtil::RmStat -I- % GFRAME - GEOMETRY TIMESTEP TG1= 8.020000 TO TG2= 8.032500 @ NSTEP 387

status  - Run Complete

>JETtransp stat TrArg::Print -U- -=- Requested  default shot  steps from default to default requested ./runsys/JETtransp -U- -=- Using default run 50621L52 main::Process -U- -=- Processing 50621L52 (JET_53) in /common/transp_shared/Data/work/jconboy/JETtest/50621L52   ==  Run History  ==  1 dirs /  'Create TWD                   ' Executed   "Tue Sep 14 13:33:25 BST 2010" cond 0   2 dbase /  'Add run to the transp database' Executed    cond 0   3 config /  'Configure the run             ' Executed   "Tue Sep 14 13:35:23 BST 2010" cond 0   4 data /  'Create input data - Ufiles   ' Executed   "Tue Sep 14 13:36:41 BST 2010" cond 0   7 trdat /  'Prepare Physics file         ' Executed   "Tue Sep 14 13:37:19 BST 2010" cond 0   8 plabel /  'Write index of data          ' Executed   "Tue Sep 14 13:37:32 BST 2010" cond 0   9 prep /  'Prepare transp makefiles     ' Executed   "Tue Sep 14 13:37:37 BST 2010" cond 0   10 runMPI /  'Execute local MPI  run     ' Executed   "Wed Sep 15 02:00:16 BST 2010" cond 0   14 rstart    'Restart transp run           '                15 trlook    'Plot transp output           '                16 cdfcnv /  'Create netcdf files          ' Executed   "Wed Sep 15 02:00:34 BST 2010" cond 0   19 dbupd  * 'Mark local run as completed  ' Ready        20 arch  * 'Copy output files to warehouse  ' Ready        21 mdstr  * 'Create mdsplus tree for output' Ready        22 tidy    'Tidy TWD after run            '

trlook

[Help/Steps_52/LogFiles/JETtransp/trlook.htm]

JET_runtr_err

[Help/Steps_52/LogFiles/JETtransp/JET_runtr_err.htm]

JET_runtr_out

[Help/Steps_52/LogFiles/JETtransp/JET_runtr_out.htm]

Step arch

[Help/Steps_52/LogFiles/JETtransp/arch.htm]

Step mdsplot

[Help/Steps_52/LogFiles/JETtransp/mdstr.htm]